Bioinformatics/Subsequence: Difference between revisions

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Line 11:
long = 20
see "DNA sequence:" + nl
see " 12345678901234567890" + nl
see " " + long + ": "
 
Line 30 ⟶ 29:
add(dnaList,baseStr)
next
see nl+ " 12345678901234567890" + nl
 
strBase = ""
Line 38 ⟶ 36:
next
 
see "sequencesubsequence to search: " + strBase + nl
 
seqok = 0
Line 57 ⟶ 55:
 
if seqok = 0
see "sequencesubsequence not found" + nl
ok
</lang>
Line 63 ⟶ 61:
<pre>
DNA sequence:
12345678901234567890
20: GAGTATAAAAAGCGACATAG
40: AAGCAGGGGGGGAACAGACA
Line 74 ⟶ 71:
180: TAGCTAAATGGATAAAAGCG
200: GGTGAAGTCGGTCGCAAACG
sequencesubsequence to search: ATGA
12345678901234567890
sequence to search: ATGA
start position of subsequence = 79
start position of subsequence = 103
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